#include <population.h>
Classes | |
| struct | SameFitComplexity |
| check for same fitness and complexity to filter uniqueness. More... | |
| struct | SortComplexity |
| Sort each island in increasing complexity. This is not thread safe. I should set complexities of the whole population before calling it, and use get_complexity instead. More... | |
Public Member Functions | |
| Population () | |
| ~Population () | |
| void | init (SearchSpace &ss, const Parameters ¶ms) |
| initialize population of programs with a starting model and/or from file | |
| void | init (vector< Individual< T > > &individuals, const Parameters ¶ms) |
| void | save (string filename) |
| void | load (string filename) |
| int | size () |
| returns population size (the effective size of the individuals) | |
| vector< size_t > | get_island_indexes (int island) |
| void | add_offspring_indexes (int island) |
| update individual vector size, distributing the expressions in num_islands | |
| void | update (vector< vector< size_t > > survivors) |
| reduce programs to the indices in survivors. Not thread safe,as it removes elements | |
| const Individual< T > & | operator[] (size_t i) const |
| setting and getting from individuals vector (will ignore islands) | |
| const Individual< T > & | operator[] (size_t i) |
| string | print_models (string sep="\n") |
| return population equations. | |
| vector< vector< size_t > > | sorted_front (unsigned rank=1) |
| return complexity-sorted Pareto front indices for each island | |
| vector< size_t > | hall_of_fame (unsigned rank=1) |
| void | migrate () |
Public Attributes | |
| size_t | pop_size |
| int | num_islands |
| float | mig_prob |
| vector< std::shared_ptr< Individual< T > > > | individuals |
| vector< vector< size_t > > | island_indexes |
Detailed Description
class Brush::Pop::Population< T >
Definition at line 12 of file population.h.
Constructor & Destructor Documentation
◆ Population()
| Brush::Pop::Population< T >::Population | ( | ) |
Definition at line 7 of file population.cpp.
◆ ~Population()
|
inline |
Definition at line 22 of file population.h.
Member Function Documentation
◆ add_offspring_indexes()
| void Brush::Pop::Population< T >::add_offspring_indexes | ( | int | island | ) |
update individual vector size, distributing the expressions in num_islands
update individual vector size and island indexes
Definition at line 136 of file population.cpp.
◆ get_island_indexes()
|
inline |
Definition at line 38 of file population.h.
◆ hall_of_fame()
| vector< size_t > Brush::Pop::Population< T >::hall_of_fame | ( | unsigned | rank = 1 | ) |
◆ init() [1/2]
| void Brush::Pop::Population< T >::init | ( | SearchSpace & | ss, |
| const Parameters & | params ) |
initialize population of programs with a starting model and/or from file
Definition at line 60 of file population.cpp.
◆ init() [2/2]
| void Brush::Pop::Population< T >::init | ( | vector< Individual< T > > & | individuals, |
| const Parameters & | params ) |
◆ load()
| void Brush::Pop::Population< T >::load | ( | string | filename | ) |
◆ migrate()
| void Brush::Pop::Population< T >::migrate | ( | ) |
◆ operator[]() [1/2]
|
inline |
◆ operator[]() [2/2]
|
inline |
setting and getting from individuals vector (will ignore islands)
Definition at line 47 of file population.h.
◆ print_models()
| string Brush::Pop::Population< T >::print_models | ( | string | sep = "\n" | ) |
return population equations.
Definition at line 211 of file population.cpp.
◆ save()
| void Brush::Pop::Population< T >::save | ( | string | filename | ) |
◆ size()
|
inline |
returns population size (the effective size of the individuals)
Definition at line 36 of file population.h.
◆ sorted_front()
| vector< vector< size_t > > Brush::Pop::Population< T >::sorted_front | ( | unsigned | rank = 1 | ) |
return complexity-sorted Pareto front indices for each island
Definition at line 231 of file population.cpp.
◆ update()
| void Brush::Pop::Population< T >::update | ( | vector< vector< size_t > > | survivors | ) |
reduce programs to the indices in survivors. Not thread safe,as it removes elements
Definition at line 159 of file population.cpp.
Member Data Documentation
◆ individuals
| vector<std::shared_ptr<Individual<T> > > Brush::Pop::Population< T >::individuals |
Definition at line 18 of file population.h.
◆ island_indexes
| vector<vector<size_t> > Brush::Pop::Population< T >::island_indexes |
Definition at line 19 of file population.h.
◆ mig_prob
| float Brush::Pop::Population< T >::mig_prob |
Definition at line 16 of file population.h.
◆ num_islands
| int Brush::Pop::Population< T >::num_islands |
Definition at line 15 of file population.h.
◆ pop_size
| size_t Brush::Pop::Population< T >::pop_size |
Definition at line 14 of file population.h.
The documentation for this class was generated from the following files:
