omop.h

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/* Brush
copyright 2022 William La Cava
license: GNU/GPL v3
*/
 
#ifndef OMOP_H
#define OMOP_H
 
// #include "../init.h"
#include <string>
#include <filesystem>
#include <fstream>
// #include "../../thirdparty/json.hpp"
#include "nlohmann/json.hpp"
 
namespace fs = std::filesystem;
 
namespace Brush::Data
{
 
 
enum class TimeValues {
    offset,
    delta,
    timestamp
};
 
enum class StringFeatures {
    categorical,
    onehot
};
 
struct OmopData
{
    std::string cdm_version;
    TimeValues tv = TimeValues::timestamp;
    StringFeatures sf = StringFeatures::categorical;
 
    OmopData(fs::directory_iterator omop_dir);
 
    OmopData(fs::path json_filename);
 
    // TODO
};
 
}
 
#endif